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Assay:

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Id: 30211
Copied From: 30210
 
GENERAL INFORMATION
 
Authors: Andrew Bain
Lab: Roslin Institute
Standard Protocol Id: Roslin
Lab Book Reference:
Confidence: High
Status: Public
Notes For Interpretation:
Linked Data - Replicated Experiment:
Linked Data - Same Experiment:
Linked Data - Same Embryo:
 
PROBE
 
Probe: GNPDA1_Probe_2_AS_DB
Gene Details
Gallus gallus Id: GG:5307
Entity Detected: GNPDA1
Gene Name: glucosamine-6-phosphate deaminase 1 [Gallus gallus]
Entrez Id: 416341
Ensembl Id: ENSGALG00000007312
 
Chemistry: RNA
Label: Digoxigenin
 
SPECIMEN
 
Organism: Gallus gallus
Breed: White Leghorn
Stage: HH20
Stage Qualifier: Exact
Sex:
Mutation:
Mounting: Wholemount
Fixative: 4% PFA
Embedding Reagent: Agarose
 
HYBRIDIZATION PROCEDURE
 
Hybridization Date: 2011-08-01
Secondary: Anti-Digoxigenin Ab
Tertiary:
Quaternary:
Final Label: Alkaline Phosphatase
Detected Using: NBT/BCIP concentration 2x lower than in Bath1
Development Time: 3
Time Unit: Hours
 
IMAGING PROCEDURE
 
Image Technique: OPT
Clearing Agent: BABB
 
IMAGE FILES
 
Local Zip File or Comment:
Number of Image Sets: Pending
Image Folder: bioptonics
Image Quality: Medium
 
EXPRESSION PATTERN DESCRIPTION
 
Detected In: wing bud, hind limb bud, pharyngeal arch I,II, Neural tube, tail mesoderm
Not Detected In:
Possibly Detected In:
 
ANNOTATIONS
 
Annotation ID: TMP:2310
  Name: wing bud
  Strength: Strong
  Pattern: Regional
  Direction: Unknown
  Note:
 
Annotation ID: TMP:746
  Name: hind limb
  Strength: Strong
  Pattern: Regional
  Direction: Unknown
  Note:
 
Annotation ID: TMP:2111
  Name: tail mesoderm
  Strength: Moderate
  Pattern: Regional
  Direction: Unknown
  Note:
 
Annotation ID: TMP:1281
  Name: neural tube
  Strength: Weak
  Pattern: Regional
  Direction: Unknown
  Note:
 
Annotation ID: TMP:2207
  Name: trunk somite
  Strength: Weak
  Pattern: Regional
  Direction: Unknown
  Note:
 
Annotation ID: TMP:2106
  Name: tail bud
  Strength: Weak
  Pattern: Regional
  Direction: Unknown
  Note:
 
Annotation ID: TMP:4
  Name: 1st pharyngeal arch
  Strength: Moderate
  Pattern: Regional
  Direction: Unknown
  Note:
 
Annotation ID: TMP:20
  Name: 2nd hyoid pharyngeal arch
  Strength: Moderate
  Pattern: Regional
  Direction: Unknown
  Note:
 
 
MISCELLANEOUS
 
References:
 
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