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Assay:

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Id: 30111
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GENERAL INFORMATION
 
Authors: Megan Davey
Lab: Roslin Institute
Standard Protocol Id: Roslin
Lab Book Reference:
Confidence: High
Status: Public
Notes For Interpretation:
Linked Data - Replicated Experiment:
Linked Data - Same Experiment: 30112
Linked Data - Same Embryo:
 
PROBE
 
Probe: IFT20_Probe_1_AS_DB
Gene Details
Gallus gallus Id: GG:7778
Entity Detected: IFT20
Gene Name: intraflagellar transport 20 homolog (Chlamydomonas) [Gallus gallus]
Entrez Id: 417671
Ensembl Id: ENSGALG00000005707
 
Chemistry: RNA
Label: Digoxigenin
 
SPECIMEN
 
Organism: Gallus gallus
Breed: ISA Brown
Stage: HH23
Stage Qualifier: Exact
Sex: Unspecified
Mutation: None (Wild-Type)
Mounting: Wholemount
Fixative: 4% PFA
Embedding Reagent:
 
HYBRIDIZATION PROCEDURE
 
Hybridization Date: 2011-03-10
Secondary: Anti-Digoxigenin Ab
Tertiary:
Quaternary:
Final Label: Alkaline Phosphatase
Detected Using: NBT+BCIP
Development Time: 30
Time Unit: Minutes
 
IMAGING PROCEDURE
 
Image Technique: Photography
Clearing Agent:
 
IMAGE FILES
 
Local Zip File or Comment:
Number of Image Sets: 1
Image Folder: photography
Image Quality: High
 
EXPRESSION PATTERN DESCRIPTION
 
Detected In: Branchial arches I, II, III and IV, head mesenchyme, somites and limbs.
Not Detected In: Central region of the limbs.
Possibly Detected In:
 
ANNOTATIONS
 
Annotation ID: TMP:3
  Name: 1st branchial arch see 1st pharyngeal arch)
  Strength: Moderate
  Pattern: Regional
  Direction:
  Note:
 
Annotation ID: TMP:23
  Name: 2nd branchial arch see 2nd pharyngeal arch)
  Strength: Moderate
  Pattern: Regional
  Direction:
  Note:
 
Annotation ID: TMP:40
  Name: 3rd branchial arch see 3rd pharyngeal arch)
  Strength: Moderate
  Pattern: Regional
  Direction:
  Note:
 
Annotation ID: TMP:57
  Name: 4th branchial arch see 4th pharyngeal arch)
  Strength: Strong
  Pattern: Regional
  Direction:
  Note:
 
Annotation ID: TMP:707
  Name: head mesenchyme
  Strength: Moderate
  Pattern: Regional
  Direction:
  Note:
 
Annotation ID: TMP:1842
  Name: somite
  Strength: Weak
  Pattern: Regional
  Direction:
  Note:
 
Annotation ID: TMP:746
  Name: hind limb
  Strength: Moderate
  Pattern: Regional
  Direction:
  Note:
 
Annotation ID: TMP:2297
  Name: wing
  Strength: Moderate
  Pattern: Regional
  Direction:
  Note:
 
 
MISCELLANEOUS
 
References:
 
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